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Computational Recognition of RNA Splice Sites by Exact Algorithms for the Quadratic Traveling Salesm
v) = ∑ w∈V :
(u,v,w)∈V (3)
t(u,v,w) = ∑ w∈V :
(w,u,v)∈V (3)
t(w,u,v), (u, v) ∈ A (6)
t ∈ {0, 1}V (3)
(7)
Constraints (6) couple the arc variables and the two-arc variables. If an arc (u, v) ∈ A is contained [...] Anja Fischer 1, Frank Fischer 2, Gerold Jäger 3, Jens Keilwagen 4, Paul Molitor 5 and Ivo Grosse 5,6,*
1 Department of Mathematics, TU Dortmund, D-44227 Dortmund, Germany; E-Mail: anja.fischer@mathematik [...] Luther University Halle-Wittenberg, D-06120 Halle, Germany; E-Mail: paul.molitor@informatik.uni-halle.de
6 German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, D-04103 Leipzig, Germany …
